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Publications by Marino Arroyo

2017

Hydraulic fracturing in cells and tissues: fracking meets cell biology
Arroyo, M. and Trepat, X.
Current Opinion in Cell Biology , Vol. 44, pp. 1-6, 2017

2016

Shape Transformations of Lipid Bilayers Following Rapid Cholesterol Uptake
Mohammad Rahimi, David Regan, Marino Arroyo, Anand Bala Subramaniam, Howard A. Stone and Margarita Staykova
Biophysical Journal , Vol. 111, pp. 2651-2657, 2016

Fourth order phase-field model for local max-ent approximants applied to crack propagation
Amiri, F.; Millán, D.; Arroyo, M.; Silani, M.; Rabczuk, T.
Computer Methods in Applied Mechanics and Engineering , Vol. 312, pp. 254-275, 2016

Coexistence of wrinkles and blisters in supported graphene
Zhang, K. and Arroyo, M.
Extreme Mechanics Letters , Vol. , Article number: , 2016

Charting molecular free-energy landscapes with an atlas of collective variables
Hashemian, B.; Millán, D and Arroyo, M.
The Journal of Chemical Physics , Vol. 145, Article number: 174109, 2016

Geometric derivation of the microscopic stress: A covariant central force decomposition
Torres-Sánchez, A.; Vanegas, J. M.; and Arroyo, M.
Journal of the Mechanics and Physics of Solids , Vol. 96, pp. 224-239, 2016

Sticking and sliding of lipid bilayers on deformable substrates
Stubbington, L.; Arroyo, M.; Staykova, M.
Soft Matter , Vol. , Article number: , 2016

2015

Hydraulic fracture and toughening of a brittle layer bonded to a hydrogel
Lucantonio, A.; Noselli, G.; Trepat, X.; DeSimone, A.; Arroyo, M.
Physical Review Letters , Vol. 115, Article number: 188105, 2015

Fracture toughening and toughness asymmetry induced by flexoelectricity
Abdollahi, A.; Peco, C.; Millán, D.; Arroyo, M.; Catalan, G.; Arias, I.
Physical Review B , Vol. 92, Article number: 94101, 2015

Examining the mechanical equilibrium of microscopic stresses in molecular simulations
Torres-Sánchez, A.; Vanegas, J. M.; Arroyo, M.
Physical Review Letters , Vol. 114, Article number: 258102, 2015

Physical principles of membrane remodelling during cell mechanoadaptation
Kosmalska, A.J.; Casares, L.; Elosegui-Artola, A.; Thottacherry, J.J.; Moreno-Vicente, R.; del Pozo, M.A.; Mayor, S.; Arroyo, M.; Navajas, D.; Trepat, X.; Gauthier, N.C.; Roca-Cusachs, P.
Nature Communications , Vol. 6, Article number: 7292, 2015

Phase-field modeling and simulation of fracture in brittle materials with strongly anisotropic surface energy
Li, B.; Peco, C.; Millán, D.; Arias, I. and Arroyo, M.
International Journal for Numerical Methods in Engineering , Vol. 102 (3-4), pp. 711-727, 2015

Efficient implementation of Galerkin meshfree methods for large-scale problems with an emphasis on maximum entropy approximants
Peco, C.; Millán, D.; Rosolen, A.; Arroyo, M.
Computers and Structures , Vol. 150, pp. 52-62, 2015

Revisiting pyramid compression to quantify flexoelectricity: A three-dimensional simulation study
Abdollahi, A. ; Millán, D. ; Peco, C. ; Arroyo, M.; Arias, I.
Physical Review B , Vol. 91, Article number: 104103, 2015

Hydraulic fracture during epithelial stretching
Casares, L. ; Vincent, R. ; Zalvidea, D. ; Campillo, N.; Navajas, D. ; Arroyo, M. ; Trepat, X.
Nature Materials , Vol. 14, pp. 343-351, 2015

Cell-based maximum entropy approximants
Millán, D. ; Sukumar N. ; and Arroyo, M.
Computer Methods in Applied Mechanics and Engineering , Vol. 284, pp. 712-731, 2015

Topological obstructions in the way of data-driven collective variables
Hashemian, B. ; and Arroyo, M.
The Journal of Chemical Physics , Vol. 142, Article number: 44102, 2015

Computing the volume enclosed by a periodic surface and its variation to model a follower pressure
Rahimi, M.; Zhang, K.; Arroyo, M.
Computational Mechanics , Vol. 55 (3), pp. 519-525, 2015

2014

Understanding and strain-engineering wrinkle networks in supported graphene through simulations
Zhang, K. and Arroyo, M.
Journal of the Mechanics and Physics of Solids , Vol. 72, pp. 61-74, 2014

Force Transduction and Lipid Binding in MscL: A Continuum-molecular Approach
Vanegas, J. M. ; and Arroyo, M.
Plos ONE , Vol. 9 (12), Article number: , 2014

Computational evaluation of the flexoelectric effect in dielectric solids
Abdollahi, A.; Peco, C.; Millán, D.; Arroyo M.; and Arias I.
Journal of Applied Physics , Vol. 116, Issue 9, Article number: 93502, 2014

Interplay of packing and flip-flop in local bilayer deformation. How phosphatidylglycerol could rescue mitochondrial function in a cardiolipin- deficient yeast mutant
Khalifat, N; Rahimi, M.; Bitbol, A-F; Seigneuret, M.; Fournier, J.-B.; Puff, N.; Arroyo, M.; and Angelova, M.
Biophysical Journal , Vol. 107, Issue 4, pp. 879-890, 2014

Phase-field modeling of fracture in linear thin shells
Amiri, F.; Millán, D.; Shen, Y.; Rabczuk, T.; and Arroyo, M.
Theoretical and Applied Fracture Mechanics , Vol. 69, pp. 102-109, 2014

Importance of force decomposition for local stress calculations in biomembrane molecular simulations
Vanegas, J.M.;Torres-Sánchez, A.; and Arroyo, M.
Journal of Chemical Theory and Computation , Vol. 10, pp. 691-702, 2014

Nonsingular Isogeometric Boundary Element Method for Stokes Flows in 3D
Heltai, L.; Arroyo, M. and DeSimone, A.
Computer Methods in Applied Mechanics and Engineering , Vol. 268, pp. 514-539, 2014

Shape control of active surfaces inspired by the movement of euglenoids
Arroyo, M. and DeSimone, A.
Journal of the Mechanics and Physics of Solids , Vol. 62, pp. 99-112, 2014

XLME interpolants, a seamless bridge between XFEM and enriched meshless methods
Amiri, F.; Anitescu, C.; Arroyo, M.; Bordas, S.P.A.; and Rabczuk, T.
Computational Mechanics , Vol. 53, Issue 1, pp. 45-57, 2014

2013

Modeling and enhanced sampling of molecular systems with smooth and nonlinear data-driven collective variables
Hashemian, B, Millán, D. and Arroyo, M.
The Journal of Chemical Physics , Vol. 139, Number 21, Article number: 214101, 2013

Curved fluid membranes behave laterally as an effective viscoelastic medium
Rahimi, M.; De Simone, A. and Arroyo, M.
Soft Matter , Vol. 9, pp. 11033-11045, 2013

An adaptive meshfree method for phase-field models of biomembranes. Part I: approximation with maximum-entropy approximants
A. Rosolen, C. Peco and M. Arroyo
Journal of Computational Physics , Vol. 249, pp. 303-319, 2013

An adaptive meshfree method for phase-field models of biomembranes. Part II: a Lagrangian approach for membranes in viscous fluids
C. Peco, A. Rosolen and M. Arroyo
Journal of Computational Physics , Vol. 249, pp. 320-336, 2013

Blending isogeometric analysis and local maximum entropy meshfree approximants
Rosolen, A. and Arroyo, M.
Computer Methods in Applied Mechanics and Engineering , Vol. 264, pp. 95-107, 2013

Adhesion and friction control localized folding in supported graphene
Zhang, K. and Arroyo, M.
Journal of Applied Physics , Vol. 113, pp. 1-8, 2013

Nonlinear manifold learning for model reduction in finite elastodynamics
Millán, D. and Arroyo, M.
Computer Methods in Applied Mechanics and Engineering , Vol. 261-262, pp. 118-131, 2013

Second order convex maximum entropy approximants with applications to high order PDE
Rosolen, A.; Millan, D. and Arroyo, M.
International Journal for Numerical Methods in Engineering , Vol. 94, Issue 2, pp. 150-182, 2013

Confined Bilayers Passively Regulate Shape and Stress
M. Staykova; M. Arroyo; M. Rahimi, and H. A. Stone
Physical Review Letters , Vol. 110, Article number: 28101, 2013

An atomistic-based foliation model for multilayer graphene materials and nanotubes
Ghosh, S. and Arroyo, M.
Journal of the Mechanics and Physics of Solids , Vol. 61, Iss. 1, pp. 235-253, 2013

Nonlinear manifold learning for meshfree finite deformation thin shell analysis
Millán, D; Rosolen, A and Arroyo, M.
International Journal for Numerical Methods in Engineering , Vol. 93, Issue 7, pp. 685-713, 2013

2012

Reverse engineering the euglenoid movement
Arroyo, M.; Heltai, L.; Millán, D. and DeSimone, A.
Proceedings of the National Academy of Science USA , Vol. 109, pp. 17874-17879, 2012

Shape dynamics, lipid hydrodynamics and the complex viscoelasticty of bilayer membranes
Rahimi, M. and Arroyo, M.
Physical Review E , Vol. 86, Num. 1, pp. 11932-11947, 2012

Thin-shell theory based analysis of radially pressurized multiwall carbon nanotubes
Shima, H.; Ghosh, S.; Arroyo, M.; Iiboshi, K. and Sato, M.
Computational Materials Science , Vol. 52, Issue 1, pp. 90-94, 2012

2011

Thin shell analysis from scattered points with maximum-entropy approximants
Millán, D; Rosolen, A and Arroyo, M.
International Journal for Numerical Methods in Engineering , Vol. 85, Iss. 6, pp. 723-751, 2011

2010

Diverse corrugation pattern in radially shrinking carbon nanotubes
Shima, H.; Sato, M.; Iiboshi K.; Ghosh S. and Arroyo M.
Physical Review B , Vol. 82, Issue 8, Article number: 85401, 2010

On the optimum support size in meshfree methods: a variational adaptivity approach with maximum entropy approximants
Rosolen, A,; Millán, D. and Arroyo, M.
International Journal for Numerical Methods in Engineering , Vol. 82, Issue 7, pp. 868-895, 2010

2009

Elastic bending modulus of monolayer graphene
Lu, Q; Arroyo, M and Huang, R
Journal of Physics D: Applied Physics , Vol. 42, Issue10, pp. 102002-102009, 2009

Smooth, second order, non-negative meshfree approximants selected by maximum entropy
C.J. Cyron, M. Arroyo, M. Ortiz
International Journal for Numerical Methods in Engineering , Vol. 79, pp. 1605-1632, 2009

Relaxation dynamics of fluid membranes
Arroyo, M. and DeSimone, A.
Physical Review E , Vol. 79, Issue 3, pp. 31914-31898, 2009

Effective coarse-grained simulations of super-thick multi-walled carbon nanotubes under torsion
Jian Zou, Xu Huang, Marino Arroyo, and Sulin Zhang
Journal of Applied Physics , Vol. 5, Issue 3, pp. 33516-9, 2009

2008

Optimization of a novel micro-opto-X-ray imaging lens
Ostadi, H., Arroyo, M., Prewett, P.D., Jiang, K.C. and Huq , S.E
Microelectronic Engineering , Vol. 85, Issues 5-6, pp. 1086-1088, 2008

Rippling and a phase-transforming mesoscopic model for multiwalled carbon nanotubes
Arroyo, M., Arias I.
Journal of the Mechanics and Physics of Solids , Vol. 56, Issue 4, pp. 1224-1244, 2008

Size dependent nonlinear elastic scaling of multiwalled carbon nanotubes
Arias I., Arroyo, M.
Physical Review Letters , Vol. 100, Issue 8, Article number: 85503, 2008

2007

On the geometric character of stress in continuum mechanics
Kanso E., Arroyo M., Tong Y., Yavari A., Marsden J.E. and Desbrun M
Zeitschrift für Angewandte Mathematik und Physik (ZAMP) , Vol. 58, Issue 5, pp. 843-856, 2007

2006

Local maximum-entropy approximation schemes: a seamless bridge between finite elements and meshfree methods
Marino Arroyo and Michael Ortiz
International Journal for Numerical Methods in Engineering , Vol. 65, Issue 13, pp. 2167-2202, 2006

2005

Continuum mechanics modeling and simulation of carbon nanotubes
Marino Arroyo and Ted Belytschko
Meccanica , Vol. 40, Issues 4-6, pp. 455-469, 2005

2004

Finite crystal elasticity of carbon nanotubes based on the exponential Cauchy-Born rule
Arroyo, M., Belytschko, T.
Physical Review B , Vol. 69, Article number: 115415, 2004

Finite element methods for the non-linear mechanics of crystalline sheets and nanotubes
Arroyo, M., Belytschko, T.
International Journal for Numerical Methods in Engineering , Vol. 59, Issue 3, pp. 419-456, 2004

2003

Nonlinear mechanical response and rippling of thick multi-walled carbon nanotubes
Arroyo, M., Belytschko,T.
Physical Review Letters , Vol. 91, Issue 21, Article number: , 2003

A finite deformation membrane based on inter-atomic potentials for the transverse mechanics of nanotubes
Arroyo, M., Belytschko, T.
Mechanics of Materials , Vol. 35, Issues 3-6, pp. 193-215, 2003

2002

An atomistic-based finite deformation membrane for single layer crystalline films
Arroyo, M., Belytschko, T.
Journal of the Mechanics and Physics of Solids , Vol. 50, Issue 9, pp. 1941-1977, 2002

2000

Adaptivity based on error estimation for viscoplastic softening materials
Díez, P., Arroyo, M. and Huerta, A.
Mechanics of Cohesive-Frictional Materials , Vol. 5, Issue 2, pp. 87-112, 2000